taxon	lfc: UR+MR+LR F10104 vs. Day 0 F10104	lfc: Day 0 F8116 vs. Day 0 F10104	lfc: UR+MR+LR  F8116 vs. Day 0 F10104	lfc: Day 0 F8116 vs. UR+MR+LR F10104	se: UR+MR+LR F10104 vs. Day 0 F10104	se: Day 0 F8116 vs. Day 0 F10104	se: UR+MR+LR  F8116 vs. Day 0 F10104	se: Day 0 F8116 vs. UR+MR+LR F10104	W: UR+MR+LR F10104 vs. Day 0 F10104	W: Day 0 F8116 vs. Day 0 F10104	W: UR+MR+LR  F8116 vs. Day 0 F10104	W: Day 0 F8116 vs. UR+MR+LR F10104	p: UR+MR+LR F10104 vs. Day 0 F10104	p: Day 0 F8116 vs. Day 0 F10104	p: UR+MR+LR  F8116 vs. Day 0 F10104	p: Day 0 F8116 vs. UR+MR+LR F10104	q: UR+MR+LR F10104 vs. Day 0 F10104	q: Day 0 F8116 vs. Day 0 F10104	q: UR+MR+LR  F8116 vs. Day 0 F10104	q: Day 0 F8116 vs. UR+MR+LR F10104	diff: UR+MR+LR F10104 vs. Day 0 F10104	diff: Day 0 F8116 vs. Day 0 F10104	diff: UR+MR+LR  F8116 vs. Day 0 F10104	diff: Day 0 F8116 vs. UR+MR+LR F10104	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
Lautropia mirabilis (SP112) 	-0.156906937304029	-0.41458607023684	-2.55938194518615	-0.257679132932811	-2.40247500788212	-2.14479587494931	1.0014834685068	1.17607836854367	1.00961710287432	1.12179531085785	0.945828253396273	1.1290625652224	-0.156674515594327	-0.352515683755172	-2.53500256473443	-0.229702451453253	-2.54007532472764	-1.89962535382336	1	1	1	1	1	1	1	1	1	1	1	1	FALSE	FALSE	FALSE	FALSE	FALSE	FALSE
Capnocytophaga endodontalis (SP113) 	0.154483096600788	0.758208158895667	-0.732130882798505	0.603725062294878	-0.886613979399294	-1.49033904169417	0.883589659612816	1.03056608864324	0.891898067711943	1.0126392628017	0.871122251291079	1.01989693262661	0.174835790482747	0.735720073900221	-0.820868336083179	0.596189664446286	-1.01778364412716	-1.46126436311167	1	1	1	1	1	1	1	1	1	1	1	1	FALSE	FALSE	FALSE	FALSE	FALSE	FALSE
Prevotella denticola (SP116) 	-0.597166343087928	3.16531088459197	-2.11146326930407	3.7624772276799	-1.51429692621614	-5.27677415389604	0.772594882705285	0.893431960249463	0.781086694287644	0.911693391031495	0.801910590807047	0.918900653205401	-0.772935928590306	3.5428673087855	-2.70323804610413	4.12691071877028	-1.88836130059355	-5.74248601901529	0.439560300202787	0.000395801800794316	0.00686675494047302	3.67669053228447e-05	0.0589774629560459	9.32965841625711e-09	1	0.0028271557199594	0.0421814946343343	0.000299387657628878	0.303312666631093	8.52997340914936e-08	FALSE	TRUE	TRUE	TRUE	FALSE	TRUE
Fusobacterium nucleatum (SP12) 	1.72763846952826	1.62526326035126	-0.120144840391744	-0.102375209176998	-1.84778330992001	-1.74540810074301	1.01320905578716	1.19054222559436	1.02132654836404	1.1327418001538	0.95332109663307	1.14000847079298	1.70511550371613	1.36514541476248	-0.117636069075256	-0.0903782390330244	-1.9382591200866	-1.53104836100815	1	1	1	1	1	1	1	1	1	1	1	1	FALSE	FALSE	FALSE	FALSE	FALSE	FALSE
Streptococcus oralis (SP14) 	4.7102120802799	3.17589079593385	2.71774600300414	-1.53432128434605	-1.99246607727577	-0.458144792929714	0.543909317655645	0.611229781393306	0.552718431562294	0.711670273924323	0.662095459668842	0.718425290161457	8.65992165859896	5.19590323085104	4.91705332735558	-2.15594403836124	-3.00933354575839	-0.637706939334988	4.72088594908594e-18	2.03728220772759e-07	8.78566246127548e-07	0.0310880351750264	0.00261821502675758	0.523664467496049	4.31623858202143e-17	1.65892979772103e-06	6.27547318662534e-06	0.159881323757279	0.0160833208786537	1	TRUE	TRUE	TRUE	FALSE	TRUE	FALSE
Solobacterium moorei (SP15) 	6.29996300693257	0.789388355340881	5.80186675918214	-5.51057465159169	-0.498096247750425	5.01247840384126	0.635894116356829	0.724500644035439	0.644613020622626	0.790610798967202	0.718115727854514	0.797640304010869	9.90725160821802	1.08956197877758	9.00054229990293	-6.97002198653284	-0.693615567004176	6.28413381148925	3.87149527832128e-23	0.275906139146447	2.24605453635252e-19	3.16891457051736e-12	0.487923328631044	3.29686652306838e-10	3.53965282589374e-22	1	1.82893012245848e-18	2.2635104075124e-11	1	2.02521800702772e-09	TRUE	FALSE	TRUE	TRUE	FALSE	TRUE
Lancefieldella rimae (SP187) 	-1.13890504765253	3.14868662113135	2.41385870512669	4.28759166878388	3.55276375277922	-0.734827916004658	1.02764659169928	1.20834926819567	1.0357445133858	1.14624001938382	0.962561647426698	1.1535056833907	-1.10826528969388	2.6057752538991	2.33055418004186	3.74057055789131	3.69094671731119	-0.637038834385844	0.267747261240397	0.00916665874904856	0.0197768799602537	0.000183602994018254	0.00022342093992782	0.524099548316753	1	0.0654761339217755	0.121486548327273	0.00167865594530975	0.00181928479655511	1	FALSE	FALSE	FALSE	TRUE	TRUE	FALSE
Shuttleworthia satelles (SP194) 	3.50347625035992	1.78984935416019	1.33025510452859	-1.71362689619972	-2.17322114583133	-0.459594249631604	0.862986882809668	1.00512056777237	0.871328115260172	0.99375333650699	0.858190551394365	1.00100550366123	4.05970973620535	1.78073100038834	1.52669824516266	-1.72439863419535	-2.53232937871471	-0.459132590131237	4.91337567852436e-05	0.0749564062334771	0.126836063987991	0.0846359039705891	0.0113307498922736	0.646138954612956	0.00044922291917937	0.535402901667693	0.652299757652524	0.535402901667693	0.0922646776942277	1	TRUE	FALSE	FALSE	FALSE	FALSE	FALSE
Filifactor alocis (SP208) 	4.10233823432638	0.752082220508818	1.5087814234688	-3.35025601381756	-2.59355681085758	0.756699202959979	0.834840990221598	0.970351544243829	0.843228061889064	0.968056776866594	0.84058632404896	0.975298932963811	4.91391568259899	0.775061600066703	1.78929223499596	-3.46080528939808	-3.08541399813033	0.775863868383887	8.9275155989919e-07	0.438303260807753	0.0735677639490057	0.000538562191731384	0.00203268999636677	0.437829368298348	8.16229997622116e-06	1	0.451916264258178	0.0043854349898127	0.0145192142597627	1	TRUE	FALSE	FALSE	TRUE	TRUE	FALSE
Streptococcus oralis_subsp._tigurinus_clade_070 (SP211) 	6.69909621963856	2.8259076777313	5.55529279337532	-3.87318854190726	-1.14380342626323	2.72938511564402	0.779941288853123	0.902511693857245	0.788420554246114	0.918309842874008	0.806456806238228	0.925522297850876	8.58923141444319	3.1311590719159	7.04610345767467	-4.21773606366392	-1.41830711504387	2.949021457378	8.7553018161514e-18	0.0017411782048752	1.8399747212114e-12	2.46767422294109e-05	0.156101120320209	0.00318781842049882	8.00484737476699e-17	0.0106958089728048	1.49826513012928e-11	0.000176262444495792	0.646704641326581	0.0163944947339939	TRUE	TRUE	TRUE	TRUE	FALSE	TRUE
Selenomonas infelix (SP22) 	3.2259063774078	0.955634682116632	1.715449314348	-2.27027169529117	-1.5104570630598	0.759814632231373	1.07639415738206	1.26845724148895	1.08442843186023	1.19197008090345	0.993878223984239	1.19923030129729	2.99695641720468	0.75338344160098	1.58189260254392	-1.90463815465101	-1.51976069764836	0.63358525164802	1	1	1	1	1	1	1	1	1	1	1	1	FALSE	FALSE	FALSE	FALSE	FALSE	FALSE
Streptococcus sp._HMT_064 (SP244) 	3.61057194997983	-2.91386021162512	-2.22013284583791	-6.52443216160495	-5.83070479581774	0.693727365787208	0.605283637245837	0.686729093812403	0.614044199565101	0.764095972109434	0.699497023099457	0.771054247180999	5.96509095538855	-4.24309999078197	-3.61559126755098	-8.53876005077346	-8.33556770546643	0.899712787165753	2.44497807708877e-09	2.20453148852886e-05	0.000299662873280974	1.3566977257482e-17	7.71272269847594e-17	0.368273116645394	1.74641291220626e-08	0.00013542122000963	0.00154112334830215	1.2404093492555e-16	6.28035991161612e-16	1	TRUE	TRUE	TRUE	TRUE	TRUE	FALSE
Lancefieldella parvula (SP275) 	0.0918859231626607	0.109648306677977	-0.877103167446789	0.0177623835153164	-0.968989090609449	-0.986751474124766	0.935383263611781	1.09451277264028	0.943612096852618	1.06037913182673	0.903797257722934	1.06764499844058	0.0982334479749649	0.10018001563698	-0.929516663014741	0.016750974233826	-1.07213103639058	-0.924231814475816	1	1	1	1	1	1	1	1	1	1	1	1	FALSE	FALSE	FALSE	FALSE	FALSE	FALSE
Prevotella intermedia (SP28) 	4.2808916311173	0.676522122697612	4.83557783307467	-3.60436950841969	0.554686201957368	4.15905571037706	0.75433893215412	0.870867441507758	0.762862043452356	0.895295422181581	0.790634106044844	0.9024883189029	5.67502411534377	0.776837082721027	6.33873172033978	-4.02589962946182	0.701571305508426	4.60843162538987	1.38669119456119e-08	0.43725489538728	2.31664221767427e-10	5.67578969298568e-05	0.482946551669445	4.05717748753257e-06	1.12916282985696e-07	1	2.11807288473076e-09	0.00034865565256912	1	2.89798391966612e-05	TRUE	FALSE	TRUE	TRUE	FALSE	TRUE
Veillonella atypica (SP3) 	0.577884659456064	-0.671401086397414	-0.642419039870048	-1.24928574585348	-1.22030369932611	0.0289820465273662	1.08200514236431	1.27537424585767	1.090032326745	1.19724823668297	0.997494033361885	1.20450765273068	0.534086795736773	-0.526434565052634	-0.589357787019409	-1.04346426043999	-1.22336942228445	0.0240613220361551	1	1	1	1	1	1	1	1	1	1	1	1	FALSE	FALSE	FALSE	FALSE	FALSE	FALSE
Streptococcus gordonii (SP30) 	2.70011624572721	1.01322393958517	-1.65275365248551	-1.68689230614204	-4.35286989821272	-2.66597759207068	0.605050697932543	0.686441859684105	0.613811546640056	0.763895123824659	0.699355380522075	0.77085279264143	4.4626280986924	1.47605208699168	-2.69260762775239	-2.20827735841031	-6.22411726490652	-3.45847821726812	8.0960498984503e-06	0.139929909858744	0.00708956490261876	0.0272249446582714	4.84274782784599e-10	0.000543236198814182	6.59249777445238e-05	0.579709626557655	0.043550184401801	0.140014001099682	4.42765515688777e-09	0.00388025856295844	TRUE	FALSE	TRUE	FALSE	TRUE	TRUE
Prevotella maculosa (SP31) 	1.00897993568542	1.06041858132502	-0.92131091927879	0.0514386456396061	-1.93029085496421	-1.98172950060381	0.798834471635687	0.925860913307438	0.807281660950689	0.935370849934105	0.81817105560101	0.942595243962268	1.26306509234565	1.14533248578008	-1.14125089648861	0.0549927824276647	-2.35927541282459	-2.10241831082604	1	1	1	1	1	1	1	1	1	1	1	1	FALSE	FALSE	FALSE	FALSE	FALSE	FALSE
Streptococcus mitis (SP35) 	4.23712156404451	2.69061172024791	2.34095047002626	-1.5465098437966	-1.89617109401825	-0.349661250221643	0.503218199809969	0.561540303253783	0.512006256086108	0.677439227277864	0.636982574916922	0.683992511878717	8.42004833220377	4.791484608776	4.57211302049514	-2.28287613342218	-2.97680214292448	-0.511206254672629	3.76329023236495e-17	1.6555172229772e-06	4.82830373922843e-06	0.0224376657052936	0.00291271918349382	0.609206639459002	3.44072249816224e-16	1.34806402442429e-05	3.44878838516316e-05	0.11539370934151	0.017892417841462	1	TRUE	TRUE	TRUE	FALSE	TRUE	FALSE
Veillonella parvula (SP37) 	2.8103156824718	-2.17043429717632	-0.405503799525063	-4.98074997964812	-3.21581948199687	1.76493049765125	1.07319187384984	1.26450944575639	1.0812302162596	1.18895904507358	0.991815634585344	1.19621970946717	2.61865166048118	-1.71642394958785	-0.375039277877251	-4.1891686684127	-3.24235610919899	1.47542335549496	0.00882780409219764	0.0860844762465424	0.707631255512225	2.79978247691028e-05	0.00118545793616306	0.140098760078466	0.0630557435156974	0.528804639800189	1	0.000255980112174654	0.00965301462304203	0.720507908974969	FALSE	FALSE	FALSE	TRUE	TRUE	FALSE
Neisseria subflava (SP50) 	2.76396812109344	-0.974098094099324	-0.612332456194365	-3.73806621519277	-3.37630057728781	0.361765637904959	0.860344005074926	1.00185613789545	0.868689494049782	0.991335250444524	0.856534467962374	0.998586605547066	3.21263134837876	-0.972293383504706	-0.704892208768066	-3.77073872185679	-3.94181519083494	0.362277679167116	0.00131524992389428	0.330904614525431	0.480877319149856	0.000162765017383567	8.08672771360278e-05	0.717144536374025	0.0093946423135306	1	1	0.00132537228440905	0.00073935796238654	1	TRUE	FALSE	FALSE	TRUE	TRUE	FALSE
Granulicatella adiacens (SP63) 	3.2890205178037	0.340525041180598	0.149217408332984	-2.9484954766231	-3.13980310947072	-0.191307632847614	1.00177593196669	1.17643914941473	1.00990916101216	1.12206816149554	0.946015010590535	1.12933540397463	3.28318979609212	0.289454020082558	0.147753297121728	-2.62773294689444	-3.31897810745175	-0.169398419791249	0.0010263953676399	0.772233961198003	0.882537468178268	0.00859559666333048	0.000903475122939738	0.865483266367952	0.00835779085078204	1	1	0.0613971190237891	0.00826034398116332	1	TRUE	FALSE	FALSE	FALSE	TRUE	FALSE
Gemella morbillorum (SP67) 	1.48156437849474	0.663217974904829	1.78593690332151	-0.818346403589914	0.304372524826766	1.12271892841668	0.97118965456002	1.13870292420412	0.979366028580454	1.0935846153613	0.926520792697798	1.1008522987976	1.52551499239964	0.582432837228704	1.82356427648419	-0.7483155780493	0.328511272737344	1.01986336372551	1	1	1	1	1	1	1	1	1	1	1	1	FALSE	FALSE	FALSE	FALSE	FALSE	FALSE
Tannerella forsythia (SP71) 	2.91345181029893	-0.0130906616729871	2.43589022383588	-2.92654247197192	-0.477561586463049	2.44898088550887	0.784584957459561	0.908250825125072	0.793056311755052	0.92249722814707	0.8093329896978	0.929712801934949	3.71336689876456	-0.0144130468267777	3.0715223972497	-3.17241329586451	-0.590068108605541	2.63412623813716	0.00020452004977845	0.988500450609074	0.00212970185913374	0.00151177693505634	0.555144988617239	0.00843541189540455	0.0018698975979744	1	0.0152121561366696	0.0123101836140302	1	0.0518175302146279	TRUE	FALSE	TRUE	TRUE	FALSE	FALSE
Fretibacterium sp._HMT_360 (SP77) 	1.53412340045197	-1.0265366712791	-1.09973749145825	-2.56066007173107	-2.63386089191021	-0.0732008201791463	0.81789293169405	0.949411528609825	0.826308113136116	0.952644573242102	0.830020801007391	0.959879124185492	1.87570199105943	-1.0812346810052	-1.33090486947342	-2.6879490459033	-3.1732468496133	-0.0762604564832692	0.0606962123667022	0.279592734637884	0.18322031479001	0.00718923661203186	0.00150744297468077	0.939211885347553	0.433544374047872	1	1	0.0585409266979737	0.0137823357685099	1	FALSE	FALSE	FALSE	FALSE	TRUE	FALSE
Prevotella saccharolytica (SP82) 	2.46340977231303	-0.567840972300834	-1.02719019759803	-3.03125074461386	-3.49059996991106	-0.4593492252972	0.67900175420183	0.777750406150816	0.687652926815106	0.828344448594852	0.744395982664826	0.83545059163671	3.6279873462312	-0.730106944091679	-1.49376256181372	-3.65940853440362	-4.68917088646185	-0.549822131787949	0.000285639256761298	0.465324817062032	0.135237690055638	0.000252798051709302	2.7431423970259e-06	0.582441377164258	0.00205849842106146	1	0.830745810341774	0.00205849842106146	2.50801590585225e-05	1	TRUE	FALSE	FALSE	TRUE	TRUE	FALSE
Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP83) 	1.38271736533507	0.996179899189537	-0.185294501259018	-0.386537466145532	-1.56801186659409	-1.18147440044856	0.895534682511056	1.04531665870023	0.903824358458063	1.02361694515102	0.878637128959513	1.03087717685583	1.5440131938363	0.952993421561089	-0.205011625903879	-0.377619252960398	-1.7845955001366	-1.14608648534837	1	1	1	1	1	1	1	1	1	1	1	1	FALSE	FALSE	FALSE	FALSE	FALSE	FALSE
Bergeyella sp._HMT_900 (SP86) 	1.1902435553872	-0.357369416314723	-0.759822900490623	-1.54761297170192	-1.95006645587782	-0.4024534841759	0.834149378484298	0.969497084166001	0.842537590151253	0.967426921949591	0.840154654765634	0.97466879220841	1.42689497359567	-0.368613193532341	-0.901826707048429	-1.59972080225256	-2.32108034492983	-0.412913070976674	1	1	1	1	1	1	1	1	1	1	1	1	FALSE	FALSE	FALSE	FALSE	FALSE	FALSE
Neisseria elongata (SP87) 	3.43870333209462	-1.86479544713741	1.96401883383671	-5.30349877923204	-1.47468449825791	3.82881428097412	0.970709117694204	1.13810997095637	0.978886181784872	1.09313796525556	0.926215127269108	1.10040564193291	3.54246526525148	-1.63850198550707	2.0063812018018	-4.85162801750476	-1.59216196630899	3.47945715204498	0.000396405624435126	0.101317020201566	0.04481559237253	1.22452129663341e-06	0.111348316660632	0.000502430706753504	0.00322787437040031	0.521058961036627	0.27529578171697	1.11956232835054e-05	0.521058961036627	0.00358879076252503	TRUE	FALSE	FALSE	TRUE	FALSE	TRUE
Parvimonas micra (SP93) 	1.75328827570079	1.2829659174008	-0.659852773793491	-0.470322358299991	-2.41314104949428	-1.94281869119429	0.826697187310387	0.960289887133736	0.835097721601697	0.96064508715347	0.83550614645562	0.967883747456035	2.12083493522582	1.33601939850704	-0.790150370100291	-0.489590135409555	-2.88823853628282	-2.0072851685967	1	1	1	1	1	1	1	1	1	1	1	1	FALSE	FALSE	FALSE	FALSE	FALSE	FALSE
Porphyromonas endodontalis (SP96) 	3.12779143389336	-0.323217254683296	0.87090124301476	-3.45100868857666	-2.2568901908786	1.19411849769806	0.925769440782304	1.0826454442816	0.934012717343353	1.05149076975982	0.897714563224589	1.05875565526841	3.37858574295807	-0.298543956740861	0.932429748378477	-3.28201519958651	-2.5140398555771	1.12785088018758	0.000728597076640002	0.765288032150233	0.351114476841851	0.00103068049210369	0.0119356944441532	0.259382901258481	0.00666145898642287	1	1	0.00839268400713005	0.0852549603153803	1	TRUE	FALSE	FALSE	TRUE	FALSE	FALSE
Streptococcus sanguinis_nov_97.893% (SPN217) 	0.753964846027725	5.24767294066253	2.08000658864838	4.49370809463481	1.32604174262065	-3.16766635201416	0.859766909716411	1.00114331121854	0.868113329497107	0.990807380797097	0.856172931769592	0.998058555220709	0.876940991223326	5.24168006903562	2.39600812241106	4.53540030254887	1.54880129167352	-3.17382816413378	0.380518689965259	1.59121089100465e-07	0.0165747230208698	5.74943325331029e-06	0.121429494961263	0.00150442727890479	1	1.45482138606139e-06	0.101816155699629	4.6816813634098e-05	0.624494545515068	0.0107459091350342	FALSE	TRUE	FALSE	TRUE	FALSE	TRUE
Veillonella dispar_parvula (SPP14) 	2.00115551441697	2.47209699172066	2.24281364507336	0.470941477303688	0.241658130656383	-0.229283346647306	0.529421456640934	0.593488966654394	0.538230126413939	0.69943760256867	0.65320400743265	0.706128564862494	3.77989121769616	4.16536301535027	4.16701617952256	0.673314496638678	0.369958126261648	-0.324704817304699	0.00015689689196054	3.10857531071616e-05	3.08612601537543e-05	0.50074723204801	0.711413690622289	0.745404488378577	0.00112069208543243	0.000282160092834325	0.000282160092834325	1	1	1	TRUE	TRUE	TRUE	FALSE	FALSE	FALSE
